Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890470.1_cds_XP_016445179.1_40162
CDS Infomation

[gene=LOC107770390] [db_xref=GeneID:107770390] [protein=pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like] [protein_id=XP_016445179.1] [location=complement(join(24249..24526,25156..25936,26860..27105))] [gbkey=CDS]
Sequence

ATGGCGACGGCTTTTTCTGCAACAAAAGTTTTGCAACCTTTGCCCGTTAATTCTACTAGA
TCTGCTGAAAAGCCCCTTTTGATCCAAAGCTCATCTTTTCTTGGATCATCATCCTCTCAT
ATGCTTTCTCTCAAGAAGCCTTTTCTGCCTCCTAATTCCCAGCGTCGATCCAATGCAGCG
GTTGTTGCTGTTTCTGATGTTGTTAAGGAAAAGAAGTCTAAGTCCAAATCCTCTCTCTCC
AATCTGTTGATTACTAAAGAGGAAGGGTTGGTACTGTACGAGGACATGGTGCTGGGAAGA
GCTTTTGAGGACATGTGCGCCCAAATGTATTACAGGGGCAAAATGTTTGGTTTCGTGCAT
TTGTACAACGGCCAAGAAGCTGTCTCAACTGGTTTCATTAAGCTCTTGAAGAAGGAAGAC
TCTGTAGTTAGCACTTACCGTGACCATGTCCATGCATTGAGTAAAGGTGTCCCAGCTCGT
CAAGTGATGAGTGAGCTATTTGGAAAAACCACGGGCTGTTGTAGAGGCCAGGGTGGATCC
ATGCACATGTTCTCCAAAGAGCACAATGTTCTTGGTGGTTTCGCTTTTATCGGTGAGGGA
ATCCCGGTGGCTACAGGTGCTGCATTCACTAGCAAGTACAGAAGGGAGGTCTTGAAGGAG
GCTGATTGTGATCATGTCACTCTAGCTTTCTTTGGTGATGGAACTTGCAACAATGGCCAA
TTCTACGAGTGCTTGAACATGGCCGCATTGTGGAAATTGCCCATTATCTTTGTTGTTGAG
AACAATCTGTGGGCAATTGGGATGTCCCACTTGAGGTCTACTTCTGATCCTGAAATTTGG
AAGAAAGGTCCTGCTTTTGGGATGCCCGGGGTTCATGTTGATGGCATGGATGTGTTAAAG
GTGAGGGAGGTAGCAAAGGAGGCTATTGGAAGAGCTAGGAGAGGTGAAGGTCCCACTTTG
GTCGAATGCGAGACTTACCGATTCAGAGGTCACTCTTTGGCTGATCCAGATGAGCTTCGT
GACCCTGCTGAAAAGAATCACTATGCCACGAGAGATCCTATTACTGCATTGAAGAAGTAT
ATGTTTGAGAACAACCTTGTCAGCGAAGCGGAGTTAAAGGCCATAGATAAGAAGATTGAT
GAGGTGGTTGAAGAGTCAGTAGAGTTTGCAGATGCAAGCCCTGTTCCAGCTCGTAGCCAG
CTGCTAGAGAATGTATTTGCTGATCCCAAGGGCTTCGGAATTGGGCCCGATGGAAGGTAC
AGATGTGAGGATCCCAAGTTCACTGAAGGCACTGCTCATGTCTAG

Peptide Sequence

PEP ID

XP_016445179.1
PEP Infomation

PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [Nicotiana tabacum]
Sequence

MATAFSATKVLQPLPVNSTRSAEKPLLIQSSSFLGSSSSHMLSLKKPFLPPNSQRRSNAA
VVAVSDVVKEKKSKSKSSLSNLLITKEEGLVLYEDMVLGRAFEDMCAQMYYRGKMFGFVH
LYNGQEAVSTGFIKLLKKEDSVVSTYRDHVHALSKGVPARQVMSELFGKTTGCCRGQGGS
MHMFSKEHNVLGGFAFIGEGIPVATGAAFTSKYRREVLKEADCDHVTLAFFGDGTCNNGQ
FYECLNMAALWKLPIIFVVENNLWAIGMSHLRSTSDPEIWKKGPAFGMPGVHVDGMDVLK
VREVAKEAIGRARRGEGPTLVECETYRFRGHSLADPDELRDPAEKNHYATRDPITALKKY
MFENNLVSEAELKAIDKKIDEVVEESVEFADASPVPARSQLLENVFADPKGFGIGPDGRY
RCEDPKFTEGTAHV

Transcript Sequence

Gene sequence data has not been registered.